CDS

Accession Number TCMCG051C45550
gbkey CDS
Protein Id XP_024444654.1
Location complement(join(11005988..11005992,11006280..11007075))
Gene LOC7467890
GeneID 7467890
Organism Populus trichocarpa

Protein

Length 266aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024588886.1
Definition transcription initiation factor IIB isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription initiation factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03124        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000769        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006949        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009960        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCAGAAATGGAGAGATCGATGACTATAGGGATTACTGTAAGGATTGCAAGGCAAACACTTATATTGTTCTTGATCACTGCACTGGGGACACAATCTGCAGCGACTGTGGATTAGTTCTTGAATCTTGCTACATCGATGAGATTGCAGAATGGCGAACCTTCAACGATGATAACAACGATAAAGATCCGAATCGTGTCGGTTATAACGTAAACCCTCTTTTAAGCCAAGGCAACCTAAAAACCTTAATCTCCAACAACAAGGGTGATCATGCAATTCCCAGGTGGCAGGACGGTGTATCAAACTCTGATAGGGTTCTCCTCCAAGGTTTTGACATTATTGAAATTATTGCTAATAGGTTAGGACTTGTGCGGCCCATCAAGGATAGGGCTAAAGAGATATTCAAGAAGATAGAAGAACAGAAAACTTGCGTTATGAGGAAGAGGGATTCAATCTGTGCGGCCTGTTTGTTCATATCTAGTAGAGAGAATAAGTTGCCGAGGACATTGAATGAAATAAGCAGTGTTGTTTATGGGGTGACCAAGAAGGAAATTAACAAAGCTGTACAGTCTATAAAGAGGCACGTAGAGTTGGAGGATATGGGGACCTTGAATCCTAGTGAACTTGTAAGGAGGTTTTGTTCAAATCTTGGAATGAAAAATCATGCTGTCAAGGCTGTGCACGAAGCTGTTGAGAAAATTCAAGATGTTGATATAAGGAGGAACCCTAAGTCCGTGTTGGCTGCCATTATTTACACAATCACTCAGCTTTCTGATGAGAAGAAACCTCTTCGAGTTTAA
Protein:  
MARNGEIDDYRDYCKDCKANTYIVLDHCTGDTICSDCGLVLESCYIDEIAEWRTFNDDNNDKDPNRVGYNVNPLLSQGNLKTLISNNKGDHAIPRWQDGVSNSDRVLLQGFDIIEIIANRLGLVRPIKDRAKEIFKKIEEQKTCVMRKRDSICAACLFISSRENKLPRTLNEISSVVYGVTKKEINKAVQSIKRHVELEDMGTLNPSELVRRFCSNLGMKNHAVKAVHEAVEKIQDVDIRRNPKSVLAAIIYTITQLSDEKKPLRV